Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs79737699 | chr11:34889770 | T/C | 0 | 214 | 15.33 | 17 | 3.83 | KM Plot |
KIRP | rs79743904 | chr11:8543209 | A/G | 0.000506 | 213 | 16.43 | 16.83 | 4.82 | KM Plot |
KIRP | rs79753724 | chr11:34772616 | T/A | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
KIRP | rs79878493 | chr11:35015437 | G/A | 0 | 214 | 16.43 | 15.48 | 3.83 | KM Plot |
KIRP | rs79878596 | chr8:30103362 | G/A | 1.07E-6 | 211 | 15.07 | 21.35 | 4.88 | KM Plot |
KIRP | rs79936644 | chr10:75545117 | C/T | 0 | 213 | 16.5 | 15.07 | 2.47 | KM Plot |
KIRP | rs80134030 | chr16:354943 | G/A | 7.11E-6 | 209 | 15.07 | 17.92 | 12.3 | KM Plot |
KIRP | rs80135224 | chr14:59883434 | C/T | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs8014119 | chr14:23354066 | C/G | 0.000532 | 214 | 16.7 | 11.95 | 16.17 | KM Plot |
KIRP | rs80150844 | chr9:112113187 | C/T | 0 | 205 | 16.93 | 16.47 | 0.97 | KM Plot |
KIRP | rs80180964 | chr19:16546467 | CG/C | 2.62E-11 | 214 | 16.5 | 13.1 | 8.08 | KM Plot |
KIRP | rs8018644 | chr14:74293531 | A/G | 0.00032 | 214 | 6.57 | 18.23 | 17 | KM Plot |
KIRP | rs8019529 | chr14:74293891 | G/C | 0.000331 | 213 | 16.97 | 18.23 | 6.57 | KM Plot |
KIRP | rs8019946 | chr14:74293630 | T/C | 0.000331 | 213 | 16.97 | 18.23 | 6.57 | KM Plot |
KIRP | rs80243473 | chr16:20440274 | T/C | 0.000359 | 212 | 16.43 | 16.72 | 1.73 | KM Plot |